OntoChoice

Evaluations for Choosing Terms
and Ontologies

About Us

The OntoChoice project is a collaborative research initiative dedicated to developing systematic methodologies for selecting, evaluating, and reusing ontological terms and vocabularies across research domains. The team is actively developing a comprehensive document that explores critical challenges in ontology selection, with a multifaceted approach focusing on several key areas: cataloging existing evaluation techniques, identifying use cases, developing potential tooling, and creating recommendations for ontology sustainability and community adoption. Our work addresses complex challenges such as term context, reuse strategies, and interoperability, with particular attention to emerging technologies like large language models. The group aims to provide practical guidance for researchers and practitioners by creating a structured framework that helps users make informed decisions when choosing ontologies, ultimately improving semantic precision and knowledge representation across disciplines like biomedicine, environmental health, and data science.

Our Mission

The OntoChoice mission is to:

Explore techniques and critical challenges in selecting terms and ontologies.

Provide recommendations for tools and practices given existing semantic technologies.

Create a widely accepted, testable method that maps concrete use-case requirements to an auditable, reproducible selection of ontologies and terms, and ideally demonstrates measurable impact on downstream data and AI tasks.

Some of Our Work

Poster from ICBO Poster from ESIP

Innovate With Us

GitHub

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Meet The Team

John Graybeal

John Graybeal

Consultant (VSSIG Co-Chair)

Asiyah Lin

Asiyah Lin

Axle Research Technology & NIH

Anna Maria Masci

Anna Maria Masci

MD Anderson Cancer Center, UT

Eric G. Stephan

Eric G. Stephan

PNNL

Juliane M. Schneider

Juliane M. Schneider

PNNL

Wolmar Nyberg Åkerström

Wolmar Nyberg Åkerström

Uppsala University

Barbara Magagna

Barbara Magagna

GO FAIR Foundation

Maria Shatz

Maria Shatz

NIEHS / NIH

Muhammad Tuan Amith

Muhammad Tuan Amith

University of Texas Medical

Trish Whetzel

Trish Whetzel

To be added

Hande Küçük McGinty

Hande Küçük McGinty

Kansas State University